deformable tissue
A Review of 3D Reconstruction Techniques for Deformable Tissues in Robotic Surgery
Xu, Mengya, Guo, Ziqi, Wang, An, Bai, Long, Ren, Hongliang
As a crucial and intricate task in robotic minimally invasive surgery, reconstructing surgical scenes using stereo or monocular endoscopic video holds immense potential for clinical applications. NeRFbased techniques have recently garnered attention for the ability to reconstruct scenes implicitly. On the other hand, Gaussian splatting-based 3D-GS represents scenes explicitly using 3D Gaussians and projects them onto a 2D plane as a replacement for the complex volume rendering in NeRF. However, these methods face challenges regarding surgical scene reconstruction, such as slow inference, dynamic scenes, and surgical tool occlusion. This work explores and reviews state-of-the-art (SOTA) approaches, discussing their innovations and implementation principles. Furthermore, we replicate the models and conduct testing and evaluation on two datasets. The test results demonstrate that with advancements in these techniques, achieving real-time, high-quality reconstructions becomes feasible. The code is available at: https://github.com/Epsilon404/
Registering Neural 4D Gaussians for Endoscopic Surgery
Huang, Yiming, Cui, Beilei, Kei, Ikemura, Zhang, Jiekai, Bai, Long, Ren, Hongliang
The recent advance in neural rendering has enabled the ability to reconstruct high-quality 4D scenes using neural networks. Although 4D neural reconstruction is popular, registration for such representations remains a challenging task, especially for dynamic scene registration in surgical planning and simulation. In this paper, we propose a novel strategy for dynamic surgical neural scene registration. We first utilize 4D Gaussian Splatting to represent the surgical scene and capture both static and dynamic scenes effectively. Then, a spatial aware feature aggregation method, Spatially Weight Cluttering (SWC) is proposed to accurately align the feature between surgical scenes, enabling precise and realistic surgical simulations. Lastly, we present a novel strategy of deformable scene registration to register two dynamic scenes. By incorporating both spatial and temporal information for correspondence matching, our approach achieves superior performance compared to existing registration methods for implicit neural representation. The proposed method has the potential to improve surgical planning and training, ultimately leading to better patient outcomes.
EndoGS: Deformable Endoscopic Tissues Reconstruction with Gaussian Splatting
Zhu, Lingting, Wang, Zhao, Cui, Jiahao, Jin, Zhenchao, Lin, Guying, Yu, Lequan
Surgical 3D reconstruction is a critical area of research in robotic surgery, with recent works adopting variants of dynamic radiance fields to achieve success in 3D reconstruction of deformable tissues from single-viewpoint videos. However, these methods often suffer from time-consuming optimization or inferior quality, limiting their adoption in downstream tasks. Inspired by 3D Gaussian Splatting, a recent trending 3D representation, we present EndoGS, applying Gaussian Splatting for deformable endoscopic tissue reconstruction. Specifically, our approach incorporates deformation fields to handle dynamic scenes, depth-guided supervision with spatial-temporal weight masks to optimize 3D targets with tool occlusion from a single viewpoint, and surface-aligned regularization terms to capture the much better geometry. As a result, EndoGS reconstructs and renders high-quality deformable endoscopic tissues from a single-viewpoint video, estimated depth maps, and labeled tool masks. Experiments on DaVinci robotic surgery videos demonstrate that EndoGS achieves superior rendering quality. Code is available at https://github.com/HKU-MedAI/EndoGS.
Efficient Deformable Tissue Reconstruction via Orthogonal Neural Plane
Yang, Chen, Wang, Kailing, Wang, Yuehao, Dou, Qi, Yang, Xiaokang, Shen, Wei
Intraoperative imaging techniques for reconstructing deformable tissues in vivo are pivotal for advanced surgical systems. Existing methods either compromise on rendering quality or are excessively computationally intensive, often demanding dozens of hours to perform, which significantly hinders their practical application. In this paper, we introduce Fast Orthogonal Plane (Forplane), a novel, efficient framework based on neural radiance fields (NeRF) for the reconstruction of deformable tissues. We conceptualize surgical procedures as 4D volumes, and break them down into static and dynamic fields comprised of orthogonal neural planes. This factorization iscretizes the four-dimensional space, leading to a decreased memory usage and faster optimization. A spatiotemporal importance sampling scheme is introduced to improve performance in regions with tool occlusion as well as large motions and accelerate training. An efficient ray marching method is applied to skip sampling among empty regions, significantly improving inference speed. Forplane accommodates both binocular and monocular endoscopy videos, demonstrating its extensive applicability and flexibility. Our experiments, carried out on two in vivo datasets, the EndoNeRF and Hamlyn datasets, demonstrate the effectiveness of our framework. In all cases, Forplane substantially accelerates both the optimization process (by over 100 times) and the inference process (by over 15 times) while maintaining or even improving the quality across a variety of non-rigid deformations. This significant performance improvement promises to be a valuable asset for future intraoperative surgical applications. The code of our project is now available at https://github.com/Loping151/ForPlane.
Neural LerPlane Representations for Fast 4D Reconstruction of Deformable Tissues
Yang, Chen, Wang, Kailing, Wang, Yuehao, Yang, Xiaokang, Shen, Wei
Reconstructing deformable tissues from endoscopic stereo videos in robotic surgery is crucial for various clinical applications. However, existing methods relying only on implicit representations are computationally expensive and require dozens of hours, which limits further practical applications. To address this challenge, we introduce LerPlane, a novel method for fast and accurate reconstruction of surgical scenes under a single-viewpoint setting. LerPlane treats surgical procedures as 4D volumes and factorizes them into explicit 2D planes of static and dynamic fields, leading to a compact memory footprint and significantly accelerated optimization. The efficient factorization is accomplished by fusing features obtained through linear interpolation of each plane and enables using lightweight neural networks to model surgical scenes. Besides, LerPlane shares static fields, significantly reducing the workload of dynamic tissue modeling. We also propose a novel sample scheme to boost optimization and improve performance in regions with tool occlusion and large motions. Experiments on DaVinci robotic surgery videos demonstrate that LerPlane accelerates optimization by over 100$\times$ while maintaining high quality across various non-rigid deformations, showing significant promise for future intraoperative surgery applications.
Robotic needle steering in deformable tissues with extreme learning machines
Perrusi, Pedro Henrique Suruagy, Cazzaniga, Anna, Baksic, Paul, Tagliabue, Eleonora, de Momi, Elena, Courtecuisse, Hadrien
Control strategies for robotic needle steering in soft tissues must account for complex interactions between the needle and the tissue to achieve accurate needle tip positioning. Recent findings show faster robotic command rate can improve the control stability in realistic scenarios. This study proposes the use of Extreme Learning Machines to provide fast commands for robotic needle steering. A synthetic dataset based on the inverse finite element simulation control framework is used to train the model. Results show the model is capable to infer commands 66% faster than the inverse simulation and reaches acceptable precision even on previously unseen trajectories.